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1

On the mechanisms of bananin activity against severe acute respiratory syndrome coronavirus

Zai Wang, Jian-Dong Huang, Kin-Ling Wong, Pei-Gang Wang, Hao-Jie Zhang, Julian A. Tanner, Ottavia Spiga, Andrea Bernini, Bo-Jian Zheng, Neri Niccolai

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 477 KB

english, 2011

2

FOXG1 Is Responsible for the Congenital Variant of Rett Syndrome

Francesca Ariani, Giuseppe Hayek, Dalila Rondinella, Rosangela Artuso, Maria Antonietta Mencarelli, Ariele Spanhol-Rosseto, Marzia Pollazzon, Sabrina Buoni, Ottavia Spiga, Sara Ricciardi, Ilaria Melon

Journal:

The American Journal of Human Genetics

Année:

2008

Langue:

english

Fichier:

PDF, 584 KB

english, 2008

3

From in silico to in vitro: a trip to reveal flavonoid binding on the Rattus norvegicus Kir6.1 ATP-sensitive inward rectifier potassium channel

Trezza, Alfonso, Cicaloni, Vittoria, Porciatti, Piera, Langella, Andrea, Fusi, Fabio, Saponara, Simona, Spiga, Ottavia

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 30.21 MB

english, 2018

4

Interactive alkaptonuria database: investigating clinical data to improve patient care in a rare disease

Cicaloni, Vittoria, Spiga, Ottavia, Dimitri, Giovanna Maria, Maiocchi, Rebecca, Millucci, Lia, Giustarini, Daniela, Bernardini, Giulia, Bernini, Andrea, Marzocchi, Barbara, Braconi, Daniela, Santucci,

Journal:

The FASEB Journal

Année:

2019

Langue:

english

Fichier:

PDF, 962 KB

english, 2019

5

Machine learning application for development of a data-driven predictive model able to investigate quality of life scores in a rare disease

Spiga, Ottavia, Cicaloni, Vittoria, Fiorini, Cosimo, Trezza, Alfonso, Visibelli, Anna, Millucci, Lia, Bernardini, Giulia, Bernini, Andrea, Marzocchi, Barbara, Braconi, Daniela, Prischi, Filippo, Santu

Journal:

Orphanet Journal of Rare Diseases

Année:

2020

Fichier:

PDF, 1.37 MB

2020

6

Cell and tissue models of alkaptonuria

Braconi, Daniela, Millucci, Lia, Spiga, Ottavia, Santucci, Annalisa

Journal:

Drug Discovery Today: Disease Models

Année:

2020

Fichier:

PDF, 679 KB

2020

7

ACE2 gene variants may underlie interindividual variability and susceptibility to COVID-19 in the Italian population

Benetti, Elisa, Tita, Rossella, Spiga, Ottavia, Ciolfi, Andrea, Birolo, Giovanni, Bruselles, Alessandro, Doddato, Gabriella, Giliberti, Annarita, Marconi, Caterina, Musacchia, Francesco, Pippucci, Tom

Journal:

European Journal of Human Genetics

Année:

2020

Fichier:

PDF, 2.09 MB

2020

8

A structurally driven analysis of thiol reactivity in mammalian albumins

Ottavia Spiga, Domenico Summa, Simone Cirri, Andrea Bernini, Vincenzo Venditti, Matteo De Chiara, Raffaella Priora, Simona Frosali, Antonios Margaritis, Danila Di Giuseppe, Paolo Di Simplicio, Neri Ni

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 451 KB

english, 2011

9

NMR studies of BPTI aggregation by using paramagnetic relaxation reagents

Andrea Bernini, Ottavia Spiga, Arianna Ciutti, Vincenzo Venditti, Filippo Prischi, Mariangela Governatori, Luisa Bracci, Barbara Lelli, Silvia Pileri, Mauro Botta, Alessandro Barge, Franco Laschi, Ner

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Année:

2006

Langue:

english

Fichier:

PDF, 399 KB

english, 2006

10

NMR studies on the surface accessibility of the archaeal protein Sso7d by using TEMPOL and Gd(III)(DTPA-BMA) as paramagnetic probes

Andrea Bernini, Vincenzo Venditti, Ottavia Spiga, Arianna Ciutti, Filippo Prischi, Roberto Consonni, Lucia Zetta, Ivana Arosio, Paola Fusi, Annamaria Guagliardi, Neri Niccolai

Journal:

Biophysical Chemistry

Année:

2008

Langue:

english

Fichier:

PDF, 385 KB

english, 2008

11

Probing protein surface accessibility with solvent and paramagnetic molecules

Andrea Bernini, Vincenzo Venditti, Ottavia Spiga, Neri Niccolai

Journal:

Progress in Nuclear Magnetic Resonance Spectroscopy

Année:

2009

Langue:

english

Fichier:

PDF, 571 KB

english, 2009

12

Metal ion complexation and folding of linear peptides

Ottavia Spiga, Maria Scarselli, Andrea Bernini, Arianna Ciutti, Leonardo Giovannoni, Franco Laschi, Luisa Bracci, Neri Niccolai

Journal:

Biophysical Chemistry

Année:

2002

Langue:

english

Fichier:

PDF, 282 KB

english, 2002

13

Structure and function correlations between the rat liver threonine deaminase and aminotransferases

Maria Scarselli, Maria Giuseppina Padula, Andrea Bernini, Ottavia Spiga, Arianna Ciutti, Roberto Leoncini, Daniela Vannoni, Enrico Marinello, Neri Niccolai

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Année:

2003

Langue:

english

Fichier:

PDF, 603 KB

english, 2003

14

Hydration studies on the archaeal protein Sso7d using NMR measurements and MD simulations

Andrea Bernini, Ottavia Spiga, Roberto Consonni, Ivana Arosio, Paola Fusi, Simone Cirri, Annamaria Guagliardi, Neri Niccolai

Journal:

BMC Structural Biology

Année:

2011

Langue:

english

Fichier:

PDF, 896 KB

english, 2011

15

Protein–thiol substitution or protein dethiolation by thiol/disulfide exchange reactions: The albumin model

Domenico Summa, Ottavia Spiga, Andrea Bernini, Vincenzo Venditti, Raffaella Priora, Simona Frosali, Antonios Margaritis, Danila Di Giuseppe, Neri Niccolai, Paolo Di Simplicio

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2007

Langue:

english

Fichier:

PDF, 1.26 MB

english, 2007

16

NMR studies on Ni(II) induced cyclization of a histidine-tagged peptide

Ottavia Spiga, Andrea Bernini, Maria Scarselli, Arianna Ciutti, Leonardo Giovannoni, Franco Laschi, Luisa Bracci, Dr Neri Niccolai

Journal:

Journal of Peptide Science

Année:

2002

Langue:

english

Fichier:

PDF, 185 KB

english, 2002

17

Evidence of a new phosphoryl transfer system in nucleotide metabolism

Daniela Vannoni, Roberto Leoncini, Stefania Giglioni, Neri Niccolai, Ottavia Spiga, Emilia Aceto, Enrico Marinello

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 698 KB

english, 2009

18

Probing the surface of a sweet protein: NMR study of MNEI with a paramagnetic probe

Neri Niccolai, Roberta Spadaccini, Maria Scarselli, Andrea Bernini, Orlando Crescenzi, Ottavia Spiga, Arianna Ciutti, Daniela Di Maro, Luisa Bracci, Claudio Dalvit, Piero A. Temussi

Journal:

Protein Science

Année:

2001

Langue:

english

Fichier:

PDF, 813 KB

english, 2001

19

NMR studies of the inclusion complex between β-cyclodextrin and paroxetine

Andrea Bernini, Ottavia Spiga, Arianna Ciutti, Maria Scarselli, Giuseppe Bottoni, Paolo Mascagni, Neri Niccolai

Journal:

European Journal of Pharmaceutical Sciences

Année:

2004

Langue:

english

Fichier:

PDF, 162 KB

english, 2004

20

Corrigendum to “NMR studies of the inclusion complex between β-cyclodextrin and paroxetine” [Eur. J. Pharm. Sci. 22 (2004) 445–450]

Andrea Bernini, Ottavia Spiga, Arianna Ciutti, Maria Scarselli, Giuseppe Bottoni, Paolo Mascagni, Neri Niccolai

Journal:

European Journal of Pharmaceutical Sciences

Année:

2006

Langue:

english

Fichier:

PDF, 93 KB

english, 2006

21

The use of a ditopic Gd(III) paramagnetic probe for investigating α-bungarotoxin surface accessibility

Andrea Bernini, Ottavia Spiga, Vincenzo Venditti, Filippo Prischi, Mauro Botta, Gianluca Croce, Angela Pui-Ling Tong, Wing-Tak Wong, Neri Niccolai

Journal:

Journal of Inorganic Biochemistry

Année:

2012

Langue:

english

Fichier:

PDF, 785 KB

english, 2012

22

Molecular modelling of S1 and S2 subunits of SARS coronavirus spike glycoprotein

Ottavia Spiga, Andrea Bernini, Arianna Ciutti, Stefano Chiellini, Nicola Menciassi, Francesca Finetti, Vincenza Causarono, Francesca Anselmi, Filippo Prischi, Neri Niccolai

Journal:

Biochemical and Biophysical Research Communications

Année:

2003

Langue:

english

Fichier:

PDF, 592 KB

english, 2003

23

Prediction of quaternary assembly of SARS coronavirus peplomer

Andrea Bernini, Ottavia Spiga, Arianna Ciutti, Stefano Chiellini, Luisa Bracci, Xiyun Yan, Bojian Zheng, Jiandong Huang, Ming-Liang He, Huai-Dong Song, Pei Hao, Guoping Zhao, Neri Niccolai

Journal:

Biochemical and Biophysical Research Communications

Année:

2004

Langue:

english

Fichier:

PDF, 755 KB

english, 2004

24

Tertiary structure prediction of SARS coronavirus helicase

Andrea Bernini, Ottavia Spiga, Vincenzo Venditti, Filippo Prischi, Luisa Bracci, Jiandong Huang, Julian A. Tanner, Neri Niccolai

Journal:

Biochemical and Biophysical Research Communications

Année:

2006

Langue:

english

Fichier:

PDF, 158 KB

english, 2006

25

MD and NMR studies of α-bungarotoxin surface accessibility

Vincenzo Venditti, Andrea Bernini, Alfonso De Simone, Ottavia Spiga, Filippo Prischi, Neri Niccolai

Journal:

Biochemical and Biophysical Research Communications

Année:

2007

Langue:

english

Fichier:

PDF, 197 KB

english, 2007

26

NMR and MD Studies on the Interaction Between Ligand Peptides and α-Bungarotoxin

Andrea Bernini, Arianna Ciutti, Ottavia Spiga, Maria Scarselli, Samuel Klein, Stefano Vannetti, Luisa Bracci, Luisa Lozzi, Barbara Lelli, Chiara Falciani, Paolo Neri, Neri Niccolai

Journal:

Journal of Molecular Biology

Année:

2004

Langue:

english

Fichier:

PDF, 335 KB

english, 2004

27

Peptide–protein interactions studied by surface plasmon and nuclear magnetic resonances

Ottavia Spiga, Andrea Bernini, Maria Scarselli, Arianna Ciutti, Luisa Bracci, Luisa Lozzi, Barbara Lelli, Daniela Di Maro, Duccio Calamandrei, Neri Niccolai

Journal:

Année:

2002

Langue:

english

Fichier:

PDF, 135 KB

english, 2002

28

NMR Studies of Protein Hydration and TEMPOL Accessibility

Neri Niccolai, Ottavia Spiga, Andrea Bernini, Maria Scarselli, Arianna Ciutti, Irene Fiaschi, Stefano Chiellini, Henriette Molinari, Piero A Temussi

Journal:

Journal of Molecular Biology

Année:

2003

Langue:

english

Fichier:

PDF, 1.61 MB

english, 2003

29

ROYAL ACADEMY OF MEDICINE IN IRELAND.

Gullotto, Danilo, Nolassi, Mario Salvatore, Bernini, Andrea, Spiga, Ottavia, Niccolai, Neri

Journal:

Année:

1897

Langue:

english

Fichier:

PDF, 451 KB

english, 1897

30

Probing the protein space for extending the detection of weak homology folds

Gullotto, Danilo, Nolassi, Mario Salvatore, Bernini, Andrea, Spiga, Ottavia, Niccolai, Neri

Journal:

Journal of Theoretical Biology

Année:

2013

Langue:

english

Fichier:

PDF, 714 KB

english, 2013

31

Searching for protein binding sites from Molecular Dynamics simulations and paramagnetic fragment-based NMR studies

Bernini, Andrea, Henrici De Angelis, Lucia, Morandi, Edoardo, Spiga, Ottavia, Santucci, Annalisa, Assfalg, Michael, Molinari, Henriette, Pillozzi, Serena, Arcangeli, Annarosa, Niccolai, Neri

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Année:

2014

Langue:

english

Fichier:

PDF, 912 KB

english, 2014

32

ProCoCoA: A quantitative approach for analyzing protein core composition

Bottini, Silvia, Bernini, Andrea, De Chiara, Matteo, Garlaschelli, Diego, Spiga, Ottavia, Dioguardi, Marco, Vannuccini, Elisa, Tramontano, Anna, Niccolai, Neri

Journal:

Computational Biology and Chemistry

Année:

2013

Langue:

english

Fichier:

PDF, 635 KB

english, 2013

33

NMR Studies of Lysozyme Surface Accessibility by Using Different Paramagnetic Relaxation Probes

Bernini, Andrea, Spiga, Ottavia, Venditti, Vincenzo, Prischi, Filippo, Bracci, Luisa, Tong, Angela Pui-Ling, Wong, Wing-Tak, Niccolai, Neri

Journal:

Journal of the American Chemical Society

Année:

2006

Langue:

english

Fichier:

PDF, 104 KB

english, 2006

34

HISTIDYL TAGS AND STRUCTURAL STABILIZATION OF LINEAR PEPTIDES

Spiga, Ottavia, Bernini, Andrea, Scarselli, Maria, Giovannoni, Leonardo, Laschi, Franco, Neri, Paolo, Bracci, Luisa, Lozzi, Luisa, Niccolai, Neri

Journal:

Spectroscopy Letters

Année:

2002

Langue:

english

Fichier:

PDF, 362 KB

english, 2002

35

NMR Structure of α-Bungarotoxin Free and Bound to a Mimotope of the Nicotinic Acetylcholine Receptor †

Scarselli, Maria, Spiga, Ottavia, Ciutti, Arianna, Bernini, Andrea, Bracci, Luisa, Lelli, Barbara, Lozzi, Luisa, Calamandrei, Duccio, Di Maro, Daniela, Klein, Samuel, Niccolai, Neri

Journal:

Année:

2002

Langue:

english

Fichier:

PDF, 327 KB

english, 2002

36

Genetic differentiation between Cinta Senese and commercial pig breeds using microsatellite

Scali, Monica, Vignani, Rita, Bigliazzi, Jacopo, Paolucci, Elisa, Bernini, Andrea, Spiga, Ottavia, Niccolai, Neri, Cresti, Mauro

Journal:

Electronic Journal of Biotechnology

Année:

2012

Langue:

english

Fichier:

PDF, 371 KB

english, 2012

37

MECP2 missense mutations outside the canonical MBD and TRD domains in males with intellectual disability

Bianciardi, Laura, Fichera, Marco, Failla, Pinella, Di Marco, Chiara, Grozeva, Detelina, Mencarelli, Maria Antonietta, Spiga, Ottavia, Mari, Francesca, Meloni, Ilaria, Raymond, Lucy, Renieri, Alessand

Journal:

Journal of Human Genetics

Année:

2015

Langue:

english

Fichier:

PDF, 889 KB

english, 2015

38

Homogentisic acid induces aggregation and fibrillation of amyloidogenic proteins

Braconi, Daniela, Millucci, Lia, Bernini, Andrea, Spiga, Ottavia, Lupetti, Pietro, Marzocchi, Barbara, Niccolai, Neri, Bernardini, Giulia, Santucci, Annalisa

Journal:

Biochimica et Biophysica Acta (BBA) - General Subjects

Année:

2016

Langue:

english

Fichier:

PDF, 1.14 MB

english, 2016

39

Hot spot mapping of protein surfaces with TEMPOL: Bovine pancreatic RNase A as a model system

Niccolai, Neri, Morandi, Edoardo, Gardini, Simone, Costabile, Valentino, Spadaccini, Roberta, Crescenzi, Orlando, Picone, Delia, Spiga, Ottavia, Bernini, Andrea

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Année:

2017

Langue:

english

Fichier:

PDF, 1.48 MB

english, 2017

40

The surge of flavonoids as novel, fine regulators of cardiovascular Cav channels

Fusi, Fabio, Spiga, Ottavia, Trezza, Alfonso, Sgaragli, Giampietro, Saponara, Simona

Journal:

European Journal of Pharmacology

Année:

2017

Langue:

english

Fichier:

PDF, 1.50 MB

english, 2017

41

Coumarins Isolated from Murraya paniculata in Vietnam and Their Inhibitory Effects against Enzyme Soluble Epoxide Hydrolase (sEH)

Khanh, Pham, Spiga, Ottavia, Trezza, Alfonso, Kim, Young, Cuong, Nguyen

Journal:

Planta Medica International Open

Année:

2017

Langue:

english

Fichier:

PDF, 344 KB

english, 2017

42

Ca v 1.2 channel current block by the PKA inhibitor H-89 in rat tail artery myocytes via a PKA-independent mechanism: electrophysiological, functional, and molecular docking studies

Fusi, Fabio, Trezza, Alfonso, Spiga, Ottavia, Sgaragli, Giampietro, Bova, Sergio

Journal:

Biochemical Pharmacology

Année:

2017

Langue:

english

Fichier:

PDF, 2.86 MB

english, 2017

43

ApreciseKUre: an approach of Precision Medicine in a Rare Disease

Ottavia Spiga,Vittoria Cicaloni…

Journal:

BMC Medical Informatics and Decision Making

Année:

2017

Langue:

english

Fichier:

PDF, 760 KB

english, 2017

44

Toward a generalized computational workflow for exploiting transient pockets as new targets for small molecule stabilizers: application to the homogentisate 1,2-dioxygenase mutants at the base of rare disease Alkaptonuria

Bernini, Andrea, Galderisi, Silvia, Spiga, Ottavia, Bernardini, Giulia, Niccolai, Neri, Manetti, Fabrizio, Santucci, Annalisa

Journal:

Computational Biology and Chemistry

Année:

2017

Langue:

english

Fichier:

PDF, 1.95 MB

english, 2017

45

Dissecting the CD93-Multimerin 2 interaction involved in cell adhesion and migration of the activated endothelium

Galvagni, Federico, Nardi, Federica, Spiga, Ottavia, Trezza, Alfonso, Tarticchio, Giulia, Pellicani, Rosanna, Andreuzzi, Eva, Caldi, Elena, Toti, Paolo, Tosi, Gian Marco, Santucci, Annalisa, Iozzo, Re

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 4.06 MB

english, 2017

46

In silico screening of anthraquinones from Prismatomeris memecyloides as novel phosphodiesterase type-5 inhibitors (PDE-5Is)

Khanh, Pham Ngoc, Huong, Tran Thu, Spiga, Ottavia, Trezza, Alfonso, Son, Ninh The, Cuong, To Dao, Ha, Vu Thi, Cuong, Nguyen Manh

Journal:

Revista Internacional de Andrología

Année:

2017

Langue:

english

Fichier:

PDF, 1.77 MB

english, 2017

47

Negative chronotropism, positive inotropism and lusitropism of 3,5-di- t -butyl-4-hydroxyanisole (DTBHA) on rat heart preparations occur through reduction of RyR2 Ca 2+ leak

Pessina, Federica, Gamberucci, Alessandra, Chen, Jialin, Liu, Boyin, Vangheluwe, Peter, Gorelli, Beatrice, Lorenzini, Stefania, Spiga, Ottavia, Trezza, Alfonso, Sgaragli, Giampietro, Saponara, Simona

Journal:

Biochemical Pharmacology

Année:

2018

Langue:

english

Fichier:

PDF, 1.04 MB

english, 2018

48

A new integrated and interactive tool applicable to inborn errors of metabolism: Application to alkaptonuria

Spiga, Ottavia, Cicaloni, Vittoria, Zatkova, Andrea, Millucci, Lia, Bernardini, Giulia, Bernini, Andrea, Marzocchi, Barbara, Bianchini, Monica, Zugarini, Andrea, Rossi, Alberto, Zazzeri, Matteo, Trezz

Journal:

Computers in Biology and Medicine

Année:

2018

Langue:

english

Fichier:

PDF, 1.20 MB

english, 2018

49

Homogentisic acid induces morphological and mechanical aberration of ochronotic cartilage in alkaptonuria

Bernardini, Giulia, Leone, Gemma, Millucci, Lia, Consumi, Marco, Braconi, Daniela, Spiga, Ottavia, Galderisi, Silvia, Marzocchi, Barbara, Viti, Cecilia, Giorgetti, Giovanna, Lupetti, Pietro, Magnani,

Journal:

Journal of Cellular Physiology

Année:

2018

Langue:

english

Fichier:

PDF, 1.34 MB

english, 2018

50

Peptides and small molecules blocking the CXCR4/CXCL12 axis overcome bone marrow‑induced chemoresistance in acute leukemias

Pillozzi, Serena, Bernini, Andrea, Spiga, Ottavia, Lelli, Barbara, Petroni, Giulia, Bracci, Luisa, Niccolai, Neri, Arcangeli, Annarosa

Journal:

Oncology Reports

Année:

2018

Langue:

english

Fichier:

PDF, 1.19 MB

english, 2018